CDS

Accession Number TCMCG077C01573
gbkey CDS
Protein Id KAF5726829.1
Location complement(join(3258093..3258689,3259602..3260430,3260840..3260980,3261953..3262245,3262348..3262546,3263916..3264118,3264777..3264985,3266340..3266484,3266574..3266984,3267166..3267384,3267629..3267776,3267900..3267988,3268238..3268501,3269958..3270148,3271660..3271816,3273061..3273231,3273383..3273658,3274879..3275190,3275346..3275505,3275669..3275856))
Organism Tripterygium wilfordii
locus_tag HS088_TW22G00513

Protein

Length 1733aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000022.1
Definition DNA-directed RNA polymerase I subunit rpa1 [Tripterygium wilfordii]
Locus_tag HS088_TW22G00513

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00182        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K02999        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005736        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006360        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTCAAACCTCCGATGTAGTCACTGAAGAAATTGGTGGAGTTGTCTTCAGCTTTATGACCGATGAAGACATTCAGAAGCATAGCCTCGTGAGGATAACAAGTGACAGGCTTGTTGATACTGTGAACCAACCTGTTCCTGGAGGACTTTATGATCCTGCGTTGGGGCCGCTTGATGAGAGAACTCCTTGTAAGTCATGTGGGCAGGGGGCGTTTAATTGTCCAGGACATTGTGGTCATATTGACCTTCTTGTTCCTGTTTATAATCCCTTGCTATTCCATACTCTTTATACTCTTCTGCGAGAGGTGTGCTTCTTTTGCCATCATTTTAAGGCCAACAGAAGCCAGGTCAAGAAGTGTGTTTCTCAATTGGAACTCATCATAAAAGGTGATATTATTGGAGCTAAAAGGTTGGACTCATCCTCACTGGATGAATATCCAGAGGACAGCAGTGGAAGCCACGAATCAAGTTCCACAGTTCACTCTGGTGCACAATGCACTGATGATGATGCTTTGAAGCAGCAGGAATGGACTTCTATGCAGTTTACTGAAGCGAAATTTGTTTTGAATACCTTTCTGAACCTGAAAATTAAAAAATGTGAGAACTGCAATGCTAAAAGCCCTACGATCAGCAAACCCTTCTTTGGGTGGTTTCAAAAGGGTGGTGTTTCAGATGCACTTGCTGCAGCAAATGTTCTTAGGGGGTTCAGTGTGAAAGGGGCAATCACTGGTGGAGATGGAGCAACAACTGAGCTGGATGACGGTACTGATGCTTCGGGAGTGTTCTCAGTAAACAGTGGTGATGAAGCTGAAACACATTCCTCTCATGGGACTCCAGATAGTGGTAAAGGAAAGCATAGACGAAAAGGGAGAGAAGTACTCACAGCGTTCATTGAACAGAAGAATTTCTTCAAGGGATCCTTGCTACCTTCAGAAGTTAAGAATATCTTAAAGCTGTTATGGGAAAATGAAGCTCAACTCTGCTCATTTATTGGTGATATTCAGCAGAAGGGATTCGGTAAGCAAGTGGGTCCCTCGATGTTCTTTTTGGAGAAAATTCTTGTTCCTCCAATCAAATTCCGCCCCCTTGCGAGAGCAGGTGATTCTGTGATGGAGCATCCACATACTAATTTATTAGTTAAGGTGCTGAAGTCCAATATATTATTGGGAAATGCCATTGCTAACAGCGTAGACAAGTCTATGGAACGAAGGTGGATGGAACTTCAGCAATCTGTTAATATCTTGTTCGACAGTAAAAAGGCGGGTCAAGGTCAAAGAGATGTGCCTTCTGGGATATGTCAGTTGCTGGAGAAGAAGGAGGGCATGTTCAGGCAGAAAATGATGGGAAAGAGGGTTAATTATGCATGCCGTTCTGTCATATCCCCAGATCCTTATTTAGCAGTTAATGAAATTGGAATTCCTCCATATTTTGCATTGAGGTTAACTTATCCTGAGAGAGTGACTCCCTGGAATGTTGGGAAGTTGAGGGACGCTGTAATCAATGGATCAGAAATTCATCCCGGAGCCACACATTATGTTGATAAATTGTCCACTGTGAAATTACCAGCAAGCCGTAAGATGCGTATTTCTATATCAAGGAAATTACCTTCTTCGAGAGGAGCAGTGTTGGAACCTGGAAATGGTTGTGATCATGAATTTGAAAGAAAACTTGTGTATCGCCACTTGCAAGATGGGGATGTTGTGCTTGTTAATCGACAGCCCACGCTTCACAAGCCCAGTATAATGGCACACGTGGTTCGTGTCTTGAAGGGAGAGAAGACAATTCGGATGCACTATGCCAACTGCAGCACGTACAATGCTGATTTTGATGGTGATGAAATGAATGTTCATTTCCCCCAAGATGAAGTCTCACGTGCAGAAGCTTATAACATTGTTAACGCCAACGATCAATATATCAGGCCATCCTCTGGTGATCCAATTAGATCCTTAATTCAGGATCACATCATAAGTGCTGTACTTCTCACGAAGAGGGATACCTTCTTAAGTCGTGATGAATTTAATCAGCTTCTTTATAGTTCTGGTGTGGGTACTGGTGGATCAGTTTCATTTGCTGGAAAACCTGGAAATAAAGTTCTGATCTCTAGTTTTGAGAATGAGATGGAGTCTCTTTTGCCTACTATATGGAAGCCGGAGCCATTATGGACTGGTAAACAGGTCATTTCTGCTGTGCTGAATCATATTACTCGTGGTAGACCTCCATTTACAGTTGAGAAAGGAGGGAAAATCTCTCATGACTTTTTTAAGAGTAGAAGTAATGAAGAGAAACTGAACACTGAAAAGGATGTTGACTTAAAGAAACTGAGTGGTAAGAAAGACAATGGTGAAGACTATTTAAGCAAAGAAAAAATAGTTGGTGGAGATAAAATGCACAAAGGGAAAAAGGATGATAAGGAGCCTGATGAAGATAAGTTGTTGATCTATAAAAATGAGTTGGTTCGTGGCGTGATTGACAAGGCGCAGTTTGCTGATTATGGTTTGGTTCATACAGTACATGAGCTATATGGCTCAAGTACTGCAGGCCTTTTGCTTTCTGCATTGAGTCGATTGTTTACTGTATTTTTGCAGATGCATGGTTTCACATGTGGAGTGAATGACCTTTTAATAATTAAAGCCAAAGATGAAGAAAGGAAGAGTCAACTTGAAAGTTGTGAAGAAATCGGTGAAAAAGTTCATCGTGAATTTATTAAGGTTCCCGAAAATGTTGTAATAGATCCACTAGACCTCCAGTTTGATATTGAGAAAACCATACGCAGAGATGGGGAGCCAGCCATGACCTTTTTGGACAGGAAGATGACTAGTGGTCTTAATGCAAAAACCAGCTCTGGGGCTTTAAGTGAGCTATTATCTGAGGGTTTGTTAAGACCATCTGGAAAGAACTGTATTTCTCTAATGACTACCTCTGGGGCGAAAGGTAGTAAGGTGAATTTCCAACAAATATCTTCCCATTTGGGTCAACAAGAATTAGAAGGCAAACGAGTCCCCCGTATGGTGTCTGGAAAGACATTACCGTGCTTTCATTCATGGGATTGGACTTCTCGAGCTGGAGGTTTTATAACTGATCGATTTCTTAGTGGACTTCGTCCTCAAGAGTACTACTTCCATTGCATGGCTGGTCGTGAAGGGTTAGTAGATACGGCAGTCAAAACATCTCGCAGTGGATACCTCCAAAGATGCCTAATAAAAAATCTGGAGTGCTTGAAAGTCGGTTACGATCATACTGTCCGTGATGTTGATGGTTCCATTGTTCAATTTCAATATGGAGAAGATGGTGTGGATGTCCATCGAACAAGTTTTATTGGAAAATTTGAAGCACTGGCAGCAAATCAGGAATTGCTTTACAAAAAATGTGGACAACAAAAGGACAATGGAAGTTTGGATATTCAGCTTGATCCATCTAATAACTACATTACAAAGTTGCCTGTTGCACTTCAAGAAAAAGCTGAAAAATTCATGGGCGGTTTATCCTTGAATGAGCGGGTTTCTTCTAATTTAGTAAAACAAGATGACCTAATAAAGTTATTGAAGCTCAAATTCTTGCTAAGTCTCGCCCAGCCTGGGGAACCAGTAGGTGTGCTTGCTGCTCAGTCTGTAGGAGAACCATCAACACAGATGACGTTGAATACTTTTCATCTGGCTGGCCGAGGTGAAATGAATGTGACTCTTGGAATTCCTCGTCTACAAGAAATATTTATGACTGCTTCAGCTCAAATTAAAACTCCAGTGATGACATGCCCCTTGCAAGAAGGGAAAACAGAGAATGATGCTAACCGTCTTGCTGATAAATTGAAGAAGATAACTGTTGCAGATATAATAGAGAATATGGAAGTTTCCGTTCTGCCATCGGCTGTGGAGAACAATCAAATTTGTCGTATTTACAAGCTTAAGATGAAGCTTTACAAATCTGAGCACTATCCCAAAAACACTGATATTACGGTAGAAGATTGGGAGGAGACCCTAGAAGTTGTATTTGTAAGGGAATTGGAGGACGCGATAGAGAATCATCTTTCTTTGCTGTCCAAAATCAGTGGCATTAAAATTTTTGGGCAAGCAAAAGCTTCAGGTGCGAAAGATGAAGATGGGTCTGTCAATGAAGCGCGTCATGGGGAAAACGATGACAATGATGATGATGGCGATGAGGATGATGCTGGTGGTGAGGCTGAGGATCTTGGTTCCTATGCTCAAAGGCAAAAGTTGCAAGCAAGTGATGAAATGAATTATGATGATGGTTCTGAAGAGGAAGGTGAAACAGATCAGGATGATGTGGAGCTGTCATCCAGATCTGAAGGTGAAACTAATTGTGTTGAGAATGAGACTGAGATTAGCAAGGATAAAGAGATGAGCACACATGATGATGAAGGTGAGATGATTGAAAGTCAAATTCTTAGACGCTCCACTAAGCATGAATCGAAGCTCAAGAAGAAGCATGAGTCAAAGGACAAGACCAAATCAAGAACCAAAAGAAAGAAGTCCAGAGCAGCATTAGTCAAAAAGGAAACTGATCGAGCAATCTTTATTGAAGCTAGTGGATTTCATTTTGAGGTTCATTTTCAATTTACGAATGAACCTCATCTTTTGCTGGCGCAGATAGCTGAGCGGACAGCTGAAAGGGTTTACATTCAAAGATACGGAAAGATTGACAAGTGTAGAGTGACGAATTGCAAAGAAAATCAAGTGATTTACTATGGTAAAAATCCCAAGAGAAGGAATGATGTCTCATCTGAAGAGAAAGAGAAAATCCCTGCTCTGCATACGACTGGAGTGGATTTCAAGGCACTTTGGCAAATGCAGGATCACCTTGATGTCAGGTATCTGTATTCAAACAGTATTCATGCAATGCTAAATACTTATGGAGTGGAAGCTGCCAGGGAGACCATCATCAGGGAGGTAATGCATGTTTTTGGTTCGTATGGGATATCTGTCAATATCAGGCACCTAACACTTATTGCCGACTACATGACCCACTCTGGGGGGTATCGGCCAATGAATCGACATGGGGCCATAAAAGACTCTATATCTCCTTTTATTAAAATGTCTTTTGAGACAGCGTCCAAGTTCTTTGTTGAGGCCGCATATCTTGGGGAAAGGGACAATTTGGACACCCCATCTGCTAGGATCTGTCTTGGTTTACCGGTGAAATTGGGAACTGGATCTTTTGAATTGATGCAGAAAGTTGAAATTTGA
Protein:  
MAQTSDVVTEEIGGVVFSFMTDEDIQKHSLVRITSDRLVDTVNQPVPGGLYDPALGPLDERTPCKSCGQGAFNCPGHCGHIDLLVPVYNPLLFHTLYTLLREVCFFCHHFKANRSQVKKCVSQLELIIKGDIIGAKRLDSSSLDEYPEDSSGSHESSSTVHSGAQCTDDDALKQQEWTSMQFTEAKFVLNTFLNLKIKKCENCNAKSPTISKPFFGWFQKGGVSDALAAANVLRGFSVKGAITGGDGATTELDDGTDASGVFSVNSGDEAETHSSHGTPDSGKGKHRRKGREVLTAFIEQKNFFKGSLLPSEVKNILKLLWENEAQLCSFIGDIQQKGFGKQVGPSMFFLEKILVPPIKFRPLARAGDSVMEHPHTNLLVKVLKSNILLGNAIANSVDKSMERRWMELQQSVNILFDSKKAGQGQRDVPSGICQLLEKKEGMFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVGKLRDAVINGSEIHPGATHYVDKLSTVKLPASRKMRISISRKLPSSRGAVLEPGNGCDHEFERKLVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANDQYIRPSSGDPIRSLIQDHIISAVLLTKRDTFLSRDEFNQLLYSSGVGTGGSVSFAGKPGNKVLISSFENEMESLLPTIWKPEPLWTGKQVISAVLNHITRGRPPFTVEKGGKISHDFFKSRSNEEKLNTEKDVDLKKLSGKKDNGEDYLSKEKIVGGDKMHKGKKDDKEPDEDKLLIYKNELVRGVIDKAQFADYGLVHTVHELYGSSTAGLLLSALSRLFTVFLQMHGFTCGVNDLLIIKAKDEERKSQLESCEEIGEKVHREFIKVPENVVIDPLDLQFDIEKTIRRDGEPAMTFLDRKMTSGLNAKTSSGALSELLSEGLLRPSGKNCISLMTTSGAKGSKVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFHSWDWTSRAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVGYDHTVRDVDGSIVQFQYGEDGVDVHRTSFIGKFEALAANQELLYKKCGQQKDNGSLDIQLDPSNNYITKLPVALQEKAEKFMGGLSLNERVSSNLVKQDDLIKLLKLKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIFMTASAQIKTPVMTCPLQEGKTENDANRLADKLKKITVADIIENMEVSVLPSAVENNQICRIYKLKMKLYKSEHYPKNTDITVEDWEETLEVVFVRELEDAIENHLSLLSKISGIKIFGQAKASGAKDEDGSVNEARHGENDDNDDDGDEDDAGGEAEDLGSYAQRQKLQASDEMNYDDGSEEEGETDQDDVELSSRSEGETNCVENETEISKDKEMSTHDDEGEMIESQILRRSTKHESKLKKKHESKDKTKSRTKRKKSRAALVKKETDRAIFIEASGFHFEVHFQFTNEPHLLLAQIAERTAERVYIQRYGKIDKCRVTNCKENQVIYYGKNPKRRNDVSSEEKEKIPALHTTGVDFKALWQMQDHLDVRYLYSNSIHAMLNTYGVEAARETIIREVMHVFGSYGISVNIRHLTLIADYMTHSGGYRPMNRHGAIKDSISPFIKMSFETASKFFVEAAYLGERDNLDTPSARICLGLPVKLGTGSFELMQKVEI